Gene PGSC0003DMP400001116


Sequence ID PGSC0003DMP400001116  add to my list
Species Solanum tuberosum
Alias No gene alias
Length 306aa
Gene Annotation PGSC0003DMT400001502 Protein
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 306 amino acids

>PGSC0003DMP400001116_SOLTU
MGEEMKQEPPKEEVKTEEKKEEQTEEKVEEEEKKEEPKPPSPFVLYVDLHCVGCAKKIER
SISKIRGVEGVVIEMAKNQVTIKGVIEPQAVCDRITKKTKRVAKVLSPLPAAEGEPIPEV
VASQVSGLTTVELNVNMHCEACAEQLKKKILRMKGVRSAETEASTGKVTVTGTMDANKLV
DYVYRRTKKQAKIVPQPEPEPEKPVEETKPDEAKPVEEPKPEDKKDDGAAPAENKEGGDG
EKPPEGEKNEGGGGGEEMIVPIEDHYDEHTINKLMYYHQYQPLYVIERIPPPQLFSDENP
NACCIT





Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323
Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015545
Heavy metal transport/detoxification group1
3 GP126431 Unannotated cluster
4 GP077890 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121
Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163
Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for PGSC0003DMP400001116



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Solyc03g080100.2.1 orthology 0.0345 1 389 2.8e-108
capan_pan_p010502 orthology 0.0848 2 393 1.63e-138
ipotf_pan_p017710 orthology 0.269 4 303 4.7e-103
itb03g24840.t1 orthology 0.266 4 277.7 1e-74