Gene Solyc01g080070.2.1


Sequence ID Solyc01g080070.2.1  add to my list
Species Solanum lycopersicum
Alias No gene alias
Length 425aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 425 amino acids

>Solyc01g080070.2.1_SOLLC
MSKEEFLKIQTCVLKVNIHCDGCKHKVKKILQKIEGVYKTNIDSEQGKVTVSGNVEAATL
IKKLAKSGKHAELWGAPKAVNNQQNQHNNGKGGNNKGQGQVQVQKGGNNQPKGGGGGGGG
AQMPNQQQLQQLKNLQDLKLPPQFKDLKLPPMGKDQNPKAVKFTMPEVDDLTDDDFDEDD
LTDDEDDDFDEDELDDELDDIPVKMKGMMGPGAGGAAQMKLPMMGGNGGGGGAQMKPPMM
GGNPGAQMKQMMGGNGGGGQMPNMMMMNGQHPQLMKGGNGGNNGGNNGGGGNGKKGGGNV
PVQINMGGNNGGKKGGGNGGNPNQGGGPPAQKGGGYFQGAGPEVMAGNPYYQQQQMAAMM
MQQQQQRANGNERFQPMMYARPPPAVNYMPPPAPYNPYYYGHPPPPSDNYSTFFSDENTN
SCSVM




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP023608 Unannotated cluster
3 GP040483 Unannotated cluster
4 GP070015 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for Solyc01g080070.2.1



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
PGSC0003DMP400055885 orthology 0.0382 1 192.6 5.4e-49
capan_pan_p005956 orthology 0.0926 2 168 3.89e-47
ipotf_pan_p007228 orthology 0.447 4 159 2.06e-43
itb13g23030.t1 orthology 0.438 4 149.4 5.8e-36