Gene Solyc01g098760.2.1


Sequence ID Solyc01g098760.2.1  add to my list
Species Solanum lycopersicum
Alias No gene alias
Length 427aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 427 amino acids

>Solyc01g098760.2.1_SOLLC
MNKQEMLKSQTCVLKVNIHCDGCKQKVKKKLQKIEGVYTVKIDSDQSKVTVTGNVDPATL
IKKLVKSGKHAELWGGGQKGGSNFNMMNNQFMNMQMDNFKGGKDNKSQKGGGGGGNKEPP
KGNAQQFLQMMQNLKGSKDNFKMPNIPNPKDQKSVKFNLPEDEFDDESDDFDDESDDYDD
ESDEEFGAPPPSKMMGGGSHGLNAMMMKGGPMGNNGGNGKKGGVEIPVQMKGMAGNHHGG
GKNNNNGGGKQGKGGNQNQNVGKNGGKGNNNGSFGGAAVPQKGGGGGKMDGGLMMNSLQQ
GGPHGMMSMGQKSGGGPMTMGPMGHMSAAQGLPAGGPGGYPGMGQGGNNPYSQQQQQYMA
QMMMNQQRPAGYDMYGAHPNMYGAHPMMYARQHPSVSYGPPPPMGAPVHDNFTHMFSDEN
TGSCSIM




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP023608 Unannotated cluster
3 GP040483 Unannotated cluster
4 GP070015 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for Solyc01g098760.2.1



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Ca_43_818.1 orthology 0.614 5 133.3 1e-30
Cc00_g13310 orthology 0.616 5 161.8 8.8e-40
PGSC0003DMP400049789 orthology 0.0333 1 317.4 1.5e-86
capan_pan_p033445 orthology 0.155 2 - -
ipotf_pan_p011347 orthology 0.515 4 - -
itb15g11860.t2 orthology 0.515 4 169.5 5.4e-42