Gene Solyc03g080100.2.1


Sequence ID Solyc03g080100.2.1  add to my list
Species Solanum lycopersicum
Alias No gene alias
Length 292aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 292 amino acids

>Solyc03g080100.2.1_SOLLC
MGEETKQEPPKEEVKTEEEQTEPKPPSPFVLYVDLHCVGCAKKIERSISKIRGVEGVVIE
MAKNTVTIKGVIEPQAVCDRITKKTKRVAKVLSPLPAAEGEPIPQVVASQVSGLTTVELN
VNMHCEACAEQLKKKILRMKGVRSAETEASTGKVTVTGTMDANKLVDYVYRRTKKQAKIV
PQPEPEPEKPVEETKPDEAKPVEEPTPEDKKDEGTPPTENKEGGDGEKPPEGEKNEGGGG
GEAMIIPIEDHYDEHTINKLMYYHPYQPLYVIERIPPPQLFSDENPNACCIT




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015545		 Heavy metal transport/detoxification group1
3 GP126431 Unannotated cluster
4 GP077890 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for Solyc03g080100.2.1



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
PGSC0003DMP400001116 orthology 0.0345 1 387.9 6.1e-108
capan_pan_p010502 orthology 0.107 2 388 9.01e-137
ipotf_pan_p017710 orthology 0.291 4 298 2.63e-101
itb03g24840.t1 orthology 0.287 4 273.9 1.4e-73