Gene Solyc06g072700.2.1


Sequence ID Solyc06g072700.2.1  add to my list
Species Solanum lycopersicum
Alias No gene alias
Length 344aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 344 amino acids

>Solyc06g072700.2.1_SOLLC
MGEEEKKVEEVKKEEAPKDEKPSDGGGGEEKKEEKKAEEESKEAKPEPPPPPPPEIVLRV
FMHCEGCARKVRKSLKGFQGVEDVLTDCKTHKVVVKGEKADPLKVLERIQKKSHRQVELL
SPIPKPPEPAAEEPKKPEEKEAVKPDEKKEEPQVITVVLKVHMHCEACAQEIKRRIQKMK
GVENAEPDLKNSQVTVKGVFEATKLVEYVSKRTGKRAVIVKVEPEKKAEEEAKPKEDQKE
EKKTDEKEAKKVEGDDKEEKKEEAAAAAPAKEEAVVAAAPAKEEAVQNDVDPIVDVKKNE
FYYYHHPQNHQLYNNPQRLAHEMFAYPPPPQIFSDENPNACSVM




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015545		 Heavy metal transport/detoxification group1
3 GP040674 Unannotated cluster
4 GP070448 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for Solyc06g072700.2.1



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
PGSC0003DMP400046761 orthology 0.0301 1 287.3 1.3e-77
capan_pan_p009765 orthology 0.099 2 347 3.49e-119
capan_pan_p035442 orthology 0.13 2 - -
ipotf_pan_p012033 orthology 0.451 4 - -
ipotf_pan_p015819 orthology 0.463 4 267 7.52e-88
itb02g17790.t1 orthology 0.439 4 - -
itb11g13550.t1 orthology 0.483 4 220.7 1.6e-57