Gene Solyc10g084000.1.1


Sequence ID Solyc10g084000.1.1  add to my list
Species Solanum lycopersicum
Alias No gene alias
Length 361aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 361 amino acids

>Solyc10g084000.1.1_SOLLC
MGEEKEKIKVEKKKNEAGKKSAGGGKNADDNSGGIATILLKLDLHCEGCAQKVRRSVRHF
EGVEDVKADASTGKLTVKGNVDPLWLREKVESKTKKKVALLSAQPKKVAAGEKKSDEKVE
KKAVEEKKKSNAKVENEAVEEKKKSDEKVENKAAEEKKGVDKKPNKVQCNNEVIQQHCNG
PVQKLKRFLIKKLKRNVSVVRQKKGNESCSRYDNKKNREMVRDGKKKHSASCSTVASRST
EPKEQKTEVMNSKKECHHGGYINPNMCNQNHWNQNYGATIQDHHGYYGLSVGYMPPPPYI
TAFHDHGYGFRTGYVSPRHFTAPRDHDHGCSYGYGHSGYVPPPYSAPQYFSDENPNACSV
M





Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323
Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015545
Heavy metal transport/detoxification group1
3 GP040674 Unannotated cluster
4 GP070448 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121
Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163
Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for Solyc10g084000.1.1



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Mba01_g11900.1 orthology 1 4 - -
PGSC0003DMP400048991 orthology 0.122 1 370.5 1.2e-102
capan_pan_p029057 orthology 0.479 2 184 2.75e-54
musac_pan_p020675 orthology 1 4 - -