Gene Solyc11g073020.1.1


Sequence ID Solyc11g073020.1.1  add to my list
Species Solanum lycopersicum
Alias No gene alias
Length 258aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 258 amino acids

>Solyc11g073020.1.1_SOLLC
MKSIDIFCASPASTAICSSMDQYTMVRRGIRHQIDRKIDRLGDPRTPKIKTPIPCSSNQL
PFDPKTYYHQNKNRKSHDEKLRRKSSADVTDLGNSSRYLLSDHSTNTPFIDFLSSSGDAS
KALVPTKPLRAKSTNERLMYRSSSLESPVYKPSSAYSNDLCVYKSTRSCPSEQVVELRVS
IHCKGCEGKVRKHISRMEGVKSFNIDLASKKVTVIGDVTPLGVLTSVSKVKNAQFWPFPT
TSSSSSSSSSSSWSSPII




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP015837 Unannotated cluster
3 GP040905 Unannotated cluster
4 GP070656 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for Solyc11g073020.1.1



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Ca_4_477.7 orthology 0.539 5 - -
Ca_84_91.1 orthology 0.529 6 211.8 1.3e-54
Cc01_g12180 orthology 0.528 6 211.5 5.9e-55
Oeu040283.1 orthology 0.481 3 - -
Oeu058521.1 orthology 0.415 3 220.7 1.7e-57
PGSC0003DMP400027269 orthology 0.0284 1 453.8 8e-128
capan_pan_p010270 orthology 0.0811 2 358 3.18e-126
ipotf_pan_p019321 orthology 0.816 6 - -
ipotf_pan_p020149 orthology 0.695 6 219 4.18e-71
itb07g12040.t1 orthology 0.8 6 - -
itb14g16600.t1 orthology 0.68 6 218.4 6.1e-57