Gene Sspon.01G0031200-3D


Sequence ID Sspon.01G0031200-3D  add to my list
Species Saccharum spontaneum
Alias No gene alias
Length 213aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 213 amino acids

>Sspon.01G0031200-3D_SACSP
MAPLLFRDMKGLSCSSPASTAICPSLERQPMVRSHKAIASPSPSPSPLAHVPPEPRTHRH
DGKKGQQQQQQHKVVLLPNNTGGFVSPAGSSRYLLSSGRFAATVTEEIQEVVESAPAPAV
DAKREEASEAADAKSGAQAQEQVVVLKVSLHCKACAGKVKKHLSKMEGVTSFNIDFAAKK
VTVVGDVTPLGVLNSVSKVKNAQLWAAPPAIAA




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP015837 Unannotated cluster
3 GP040905 Unannotated cluster
4 GP070656 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for Sspon.01G0031200-3D



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Sspon.01G0031200-1A ultra-paralogy 0.0114 0 - -
Sspon.01G0031200-1P ultra-paralogy 0.0119 0 - -
Sspon.01G0031200-2B ultra-paralogy 0.0102 0 - -
maize_pan_p014397 orthology 0.391 2 - -
maize_pan_p019962 orthology 0.112 2 - -
maize_pan_p032298 orthology 0.206 2 - -
maize_pan_p043327 orthology 0.365 2 - -
sorbi_pan_p010670 orthology 0.0369 1 - -