Gene Sspon.02G0007720-1P
| Sequence ID | Sspon.02G0007720-1P add to my list |
|---|---|
| Species | Saccharum spontaneum |
| Alias | No gene alias |
| Length | 287aa |
Length: 287 amino acids
>Sspon.02G0007720-1P_SACSP MVAVANEEALAHDEDIMDDVDSDVEESDSEDDSGEEAQDKPSDKAIYNKEAILEKLEDIA WPKNVDWMHKLTIEHDQGEKVDVNDDLARELAFYTQALDGTRQAFEKLQSMKVRFLRPTD YYAEMVKTDAHMHKIKGRLLSEKKRIEEAEERRKARESRKKAKEVQAEKKKERAKQKKEQ IESVKKWRKQRQQGGFTKGNDDVPDLNFEGEEGFKQSKKKRPGVSPGDRSGGLAKRGKEG KNRRARDSKFGHGGRKGLKKQNTAETTNDFRSFNQGGESQNKKRKRF
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Unknown function duf1138 family
GP002478 |
Unknown function duf1138 family |
| 2 | GP018276 | Unannotated cluster |
| 3 | GP042981 | Unannotated cluster |
| 4 | GP075980 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Eukaryotic rRNA processing
IPR008610
|
Eukaryotic rRNA processing | Family |
Figure 1: IPR domains for Sspon.02G0007720-1P
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| Sspon.02G0007720-1A | ultra-paralogy | 0.0326 | 0 | - | - |
| Sspon.02G0007720-2B | ultra-paralogy | 0.0024 | 0 | - | - |
| Sspon.02G0007720-3C | ultra-paralogy | 0.0065 | 0 | - | - |
| Sspon.02G0007720-4D | ultra-paralogy | 0.0202 | 0 | - | - |
| maize_pan_p000100 | orthology | 0.0277 | 1 | 426 | 8.53e-152 |