Gene Sspon.03G0031090-2C


Sequence ID Sspon.03G0031090-2C  add to my list
Species Saccharum spontaneum
Alias No gene alias
Length 161aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 161 amino acids

>Sspon.03G0031090-2C_SACSP
MDCPGCEKKIRKAVQRLEGVHDVEIDMAQQKVTVNGDVEQKKVLKAVRRTGRRAVLWPLP
YAAGAAAGAGAAHVLAQQQLMYQPGAAGLAAHASHAARPTSSYNYYKHGYDDSRMYGAYY
HHGANSAVAGTRTTDYFSDENAQGCSVIPTISTSTMANALT





Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323
Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015397
Heavy metal transport/detoxification group1
3 GP040065 Unannotated cluster
4 GP078604 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121
Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163
Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for Sspon.03G0031090-2C



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Mba03_g16740.1 orthology 0.499 3 - -
Sspon.03G0031090-1B ultra-paralogy 0.001 0 - -
XP_008813766.1 orthology 0.61 4 151.8 6.3e-37
XP_010920018.1 orthology 0.623 5 152.1 5.1e-37
cocnu_pan_p020915 orthology 0.631 5 - -
musac_pan_p001588 orthology 0.519 3 145 1.68e-45
sorbi_pan_p007128 orthology 0.0249 1 - -