Gene Sspon.04G0014280-2C


Sequence ID Sspon.04G0014280-2C  add to my list
Species Saccharum spontaneum
Alias No gene alias
Length 616aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 616 amino acids

>Sspon.04G0014280-2C_SACSP
MPLFAVPPPLSLSLRTSLLSSTAQSRLTHTQHSHCNCVSALEVRYCGLQPPLNAYTSLPT
LFLRNVSYLLPPRSPLSDLRARAPDLKPLVLRLRCSIQLVEVLFQFQFQDEQGGCRQGAG
QAEAALLVFAACVPVPRLLAATLMLRVNIHCDGCEKKVKKTLHKIDGVYQSSIDAEQGKV
TVSGLLDPETIIRKLNKAGKPAQLWGSKPGVPHNAHHGGGGGGKGQPKDAGGKGHSKDAG
GGKGHSKDAGGGKAQKGGAGGGGHKGAGGGGGGGGGGGGGKDPKMVMPQPTPQQLQQLQQ
QLQMKGLKLPPHLLGGNMPAFPAAAPLKDPKSVKFTLPEDNFDDDGSEFDDEFDDDDFDD
EDDYDYDDDVYDDPKMMMKPMAMLPPAAGGGDKKGGGGKKGGGGGGNEIPVQIKGNNLGG
GQPYNAKGGAPGGGSHLGQGKKGGGVGVGGPMGGMLPQQSMMRPNMLGVAGAGFPGTAQM
GGGPIGMPMGHPHMGGIMQQGGGGGGGGGGMPGLGFYQGSANGGGGMHSGAEMLQAAAAA
GNPMAQQQYMALMQQQQQQQQMMLQHGNGGAGYPAMGYGYGRPPMHYPMGYPMPPHSHAD
NYNIFSDENPNSCSLM




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP023608 Unannotated cluster
3 GP040483 Unannotated cluster
4 GP141523 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for Sspon.04G0014280-2C



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Sspon.04G0014270-1A ultra-paralogy 0.0315 0 - -
Sspon.04G0027130-1B ultra-paralogy 0.0329 0 - -
Sspon.04G0037020-1D ultra-paralogy 0.0174 0 - -
maize_pan_p000549 orthology 0.134 1 - -
maize_pan_p023738 orthology 0.106 1 - -
sorbi_pan_p005063 orthology 0.0946 2 - -