Gene Sspon.05G0002700-1A
| Sequence ID | Sspon.05G0002700-1A add to my list | ||
|---|---|---|---|
| Species | Saccharum spontaneum | ||
| Alias | No gene alias | ||
| Length | 333aa | ||
| Gene Ontology |
 Display term(s) (1)
|
Length: 333 amino acids
>Sspon.05G0002700-1A_SACSP MWPCIKCAAATAKGVISTQQQQSAGQQQQLSSHAEGPVSPASSSAVVIIAMAREEELKRI DLKVNVSCCDGCRRKVMKAMSLKGVLRTEIQPSHDRVTVVGDVDVKVLVKKLAKVGKIAE ALPASEEGKKQRDEGGRKDGSDRAAPAQAEEKCKGKEDGMGDGDKAAAKVAPSKHEGCKK CAREAAARAMPEGDNGDHGSVKKAPSSKDDAAGGWSGEEGGDADGLFGAKPLAVAPDHHR AALQPQAQVQVQQHYHRAEPAMVVPVHVPAYYPPPTAAAAVPYYGYYGMPPPPPPMMMAL APPAQRHPQVRPQPSRFDEEYFNDDNTVGCSVM
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
| 2 | GP023608 | Unannotated cluster |
| 3 | GP040483 | Unannotated cluster |
| 4 | GP080800 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
|
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for Sspon.05G0002700-1A
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| Sspon.05G0002700-1P | ultra-paralogy | 0.011 | 0 | - | - |
| Sspon.05G0002700-2C | ultra-paralogy | 0.0148 | 0 | - | - |
| Sspon.05G0002700-3D | ultra-paralogy | 0.0148 | 0 | - | - |
| maize_pan_p029721 | orthology | 0.143 | 2 | - | - |
| sorbi_pan_p000076 | orthology | 0.0644 | 1 | - | - |