Gene Sspon.06G0006630-1A
Sequence ID | Sspon.06G0006630-1A add to my list | ||
---|---|---|---|
Species | Saccharum spontaneum | ||
Alias | No gene alias | ||
Length | 144aa | ||
Gene Ontology |
Display term(s) (1)
|
Length: 144 amino acids
>Sspon.06G0006630-1A_SACSP MGGVASELVGASRERQSRKRKQFHTVELKVRMDCDGCELKVRNTLARMRGVESVEINRKQ QKVTVKGFVEAQRVLRRAQSTGKRVELWPYVPYTNLYVAPPVYDKRAPPGHVRRVDAQIV APAADQEEHLATLFSDDNPNACSL
Clustering Level | Family ID | Family Name |
---|---|---|
1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
2 | Heavy metal transport/detoxification group1
GP015397 |
Heavy metal transport/detoxification group1 |
3 | GP040065 | Unannotated cluster |
4 | GP463617 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
ID | Name | Type |
---|---|---|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for Sspon.06G0006630-1A
Homology | RBH | ||||
---|---|---|---|---|---|
Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
Mba03_g04290.1 | orthology | 0.819 | 3 | - | - |
Sspon.06G0006630-2B | ultra-paralogy | 0.0251 | 0 | - | - |
Sspon.06G0006630-3D | ultra-paralogy | 0.0211 | 0 | - | - |
maize_pan_p015391 | orthology | 0.0287 | 2 | 276 | 2.31e-97 |
musac_pan_p016760 | orthology | 0.821 | 2 | - | - |
musac_pan_p042970 | orthology | 0.825 | 3 | - | - |
sorbi_pan_p005802 | orthology | 0.0285 | 2 | 271 | 1.37e-95 |