Gene Sspon.07G0012960-1A


Sequence ID Sspon.07G0012960-1A  add to my list
Species Saccharum spontaneum
Alias No gene alias
Length 361aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 361 amino acids

>Sspon.07G0012960-1A_SACSP
MAAAEQGPEPLRYQTLALRVSIHCEGCKKKVKKVLHSIEGVYKTDIDTQQQKVVVIGNVS
ADALVKKLLKSGKHAEPWPEPAAPAPPAAGSPPGPGGSPGSGGGKKKKKKKSNKSPAAAT
NNKPAEPAPAPAEGNGGPSPPEQHDKADGGASCDEASDGEQDKPEAGGGGNGSPDAGEAH
ESGASGKVAPSAMTPHGPQPIAPAANGNGGGKKKGKKGGHGNGNGNANANGDGGAGAGAG
AIVEVHPPPDAPMKPTAGNSGPLTVVDAGPYPPPPPGAAMSYPGYYAPGGVHPPAYVMSY
SSAHPSSALRSSAYYHPMAGAAYTPGAAGGCGGYFYSTAPVSAAPGSYYLFSEENANACS
V




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP023608 Unannotated cluster
3 GP040483 Unannotated cluster
4 GP070015 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for Sspon.07G0012960-1A



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Sspon.07G0012960-2B ultra-paralogy 0.0051 0 - -
Sspon.07G0012960-3D ultra-paralogy 0.0033 0 - -
cocnu_pan_p024954 orthology 0.668 3 - -
maize_pan_p020073 orthology 0.0811 1 - -
sorbi_pan_p019648 orthology 0.0583 2 - -