Gene XP_019707878.1


Sequence ID XP_019707878.1  add to my list
Species Elaeis guineensis
Alias No gene alias
Length 88aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 88 amino acids

>XP_019707878.1_ELAGV
METIELKVEMVALHEKKLRKCLSKVKGIEKVEVEASIQKVVVTGYVHRNKILKALRRVGL
RAEFWSPQNEILSAYASGSLMINNFSFL





Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323
Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015397
Heavy metal transport/detoxification group1
3 GP040065 Unannotated cluster
4 GP078604 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121
Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163
Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for XP_019707878.1



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Ca_12_32.9 orthology 0.495 9 - -
Ca_3_262.11 orthology 0.495 9 - -
Ca_455_136.3 orthology 0.495 9 - -
Ca_68_16.11 orthology 0.518 9 - -
Cc10_g00290 orthology 0.518 9 - -
Cg3g025710.1 orthology 0.389 11 - -
Cm122260.1 orthology 0.4 10 - -
Cs3g27690.1 orthology 0.389 11 - -
DCAR_023025 orthology 0.378 6 - -
HORVU7Hr1G051110.3 orthology 0.638 7 - -
MELO3C017056.2.1 orthology 0.534 11 119 1.3e-27
Manes.05G127500.1 orthology 0.427 9 - -
Manes.18G002200.1 orthology 0.44 9 - -
Mba08_g25790.1 orthology 0.261 5 - -
ORGLA08G0178600.1 orthology 0.358 6 - -
Oeu013567.1 orthology 0.399 7 - -
Sspon.06G0001840-1A orthology 0.566 5 - -
Sspon.06G0001840-2C orthology 0.377 5 - -
Sspon.06G0001840-3D orthology 0.388 5 - -
XP_017697769.1 orthology 0.0635 2 - -
bradi_pan_p007471 orthology 0.368 6 - -
cajca.ICPL87119.gnm1.ann1.C.cajan_11445.1 orthology 0.544 7 - -
cajca.ICPL87119.gnm1.ann1.C.cajan_22304.1 orthology 0.542 7 - -
cajca.ICPL87119.gnm1.ann1.C.cajan_22894.1 orthology 0.54 6 - -
capan_pan_p037558 orthology 0.505 8 - -
cicar_pan_p012771 orthology 0.662 8 - -
cocnu_pan_p029661 orthology 0.0513 1 159 7.46e-53
cucsa_pan_p017207 orthology 0.534 11 118 8.45e-37
maize_pan_p023740 orthology 0.36 5 - -
maldo_pan_p020708 orthology 0.424 9 - -
medtr_pan_p031498 orthology 0.594 8 - -
musac_pan_p036492 orthology 0.249 5 - -
orysa_pan_p046260 orthology 0.334 6 - -
phavu.G19833.gnm2.ann1.Phvul.002G208500.1 orthology 0.551 6 - -
sorbi_pan_p020199 orthology 0.336 5 - -
soybn_pan_p018879 orthology 0.594 6 - -
soybn_pan_p037728 orthology 0.619 7 - -
soybn_pan_p037999 orthology 0.66 7 - -
soybn_pan_p041984 orthology 0.629 7 - -
thecc_pan_p004256 orthology 0.437 10 - -
tritu_pan_p008810 orthology 0.374 7 - -
vitvi_pan_p014910 orthology 0.35 8 - -
vitvi_pan_p031077 orthology 0.35 8 - -