Gene bradi_pan_p037806


Sequence ID bradi_pan_p037806  add to my list
Species Brachypodium distachyon
Alias No gene alias
Pangenome status Dispensable (31/54)
Length 140aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 140 amino acids

>bradi_pan_p037806_BRADI
MEEENAAPTNSITIDLKVYMHCDACERSVRRTIKKIDAITHPYVGVETVEVDREENKVKV
TGDFDSEKVLKKIKKKTGKKAEILIPEEIEEEEQEPDVVCVPYDGPVPDMDDVLGNEFLR
PARRDLYYFDDENTEACRIM


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015397		 Heavy metal transport/detoxification group1
3 GP040065 Unannotated cluster
4 GP500719 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for bradi_pan_p037806



Represented sequence(s):
BRADI_Mon3_350_v1.Mon3
Brdisv1Mon31039541m_1
BRADI_BdTR1i_345_v1.BdTR1i
Brdisv1BdTR1i1043798m_1
BRADI_ABR7_369_v1.ABR7
Brdisv1ABR71042618m_1
BRADI_Bd21_3_378_v1.Bd21-3_r
Brdisv1Bd21-3_r1041125m_1
BRADI_Koz_1_330_v1.Koz-1
Brdisv1Koz-11042548m_1
BRADI_ABR6_336_v1.ABR6_r
Brdisv1ABR6_r1043084m_1
BRADI_BdTR7a_329_v1.BdTR7a
Brdisv1BdTR7a1041676m_1
BRADI_Foz1_366_v1.Foz1
Brdisv1Foz11039727m_1
BRADI_Bd30_1_344_v1.Bd30-1
Brdisv1Bd30-11038033m_1
BRADI_Per1_326_v1.Per1
Brdisv1Per11042312m_1
BRADI_Sig2_371_v1.Sig2
Brdisv1Sig21039104m_1
BRADI_BdTR11i_363_v1.BdTR11I
Brdisv1BdTR11I1040759m_1
BRADI_Uni2_327_v1.Uni2
Brdisv1Uni21039718m_1
BRADI_BdTR2b_376_v1.BdTR2B
Brdisv1BdTR2B1040446m_1
BRADI_Ron2_360_v1.RON2
Brdisv1RON21043329m_1
BRADI_Mig3_377_v1.Mig3
Brdisv1Mig31041379m_1
BRADI_BdTR3c_354_v1.BdTR3C
Brdisv1BdTR3C1041174m_1
BRADI_ABR9_333_v1.ABR9_r
Brdisv1ABR9_r1031808m_1
BRADI_ABR3_343_v1.ABR3
Brdisv1ABR31042054m_1
BRADI_Jer1_375_v1.Jer1
Brdisv1Jer11038915m_1
BRADI_BdTR11g_357_v1.BdTR11G
Brdisv1BdTR11G1041942m_1
BRADI_ABR4_364_v1.ABR4
Brdisv1ABR41041991m_1
BRADI_Arn1_355_v1.Arn1
Brdisv1Arn11042778m_1
BRADI_ABR2_337_v1.ABR2
Brdisv1ABR21042397m_1
BRADI_Mur1_373_v1.Mur1
Brdisv1Mur11038364m_1
BRADI_BdTR11a_380_v1.BdTR11A
Brdisv1BdTR11A1037800m_1
BRADI_Koz_3_368_v1.Koz-3
Brdisv1Koz-31035960m_1
BRADI_S8iiC_340_v1.S8iiC
Brdisv1S8iiC1041483m_1
BRADI_Luc1_347_v1.Luc1
Brdisv1Luc11042888m_1
BRADI_Bd2_3_353_v1.Bd2-3
Brdisv1Bd2-31038111m_1
BRADI_ABR5_379_v1.ABR5
Brdisv1ABR51039993m_1
Unrepresented genome(s):
BRADI_ABR8_356_v1.ABR8
BRADI_Adi_10_381_v1.Adi-10
BRADI_Adi_12_359_v1.Adi-12
BRADI_Adi_2_372_v1.Adi-2
BRADI_Bd18_1_362_v1.Bd18-1
BRADI_Bd1_1_349_v1.Bd1-1
BRADI_Bd21v2_1_283_Bd21v2
BRADI_Bd29_1_346_v1.Bd29-1
BRADI_Bd3_1_328_v1.Bd3-1_r
BRADI_BdTR10c_374_v1.BdTR10C
BRADI_BdTR12c_352_v1.BdTR12c
BRADI_BdTR13a_334_v1.BdTR13a
BRADI_BdTR13c_365_v1.BdTR13C
BRADI_BdTR2g_367_v1.BdTR2G
BRADI_BdTR5i_370_v1.BdTR5I
BRADI_BdTR8i_348_v1.BdTR8i
BRADI_BdTR9k_358_v1.BdTR9K
BRADI_Bis_1_338_v1.Bis-1
BRADI_Gaz_8_339_v1.Gaz-8
BRADI_Kah_1_351_v1.Kah-1
BRADI_Kah_5_342_v1.Kah-5
BRADI_Tek_2_341_v1.Tek-2
BRADI_Tek_4_332_v1.Tek-4
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
bradi_pan_p054384 ultra-paralogy 0.0742 0 - -