Gene brana_pan_p002632


Sequence ID brana_pan_p002632  add to my list
Species Brassica napus
Alias No gene alias
Pangenome status Core (3/3)
Length 360aa



Length: 360 amino acids

>brana_pan_p002632_BRANA
MMKLLHLFITSSKPVVEILLITTVGFYMALDGVNLLGQDARKFLNNIVFYVFSPSLIGSR
LANSVTYESLMQMWFMPVNVLLTFIIGSFLGWIVILITKPPSHLRGLIVGCCAAGNLGNM
PLIIVPAVCKEKGGPFGDPENCQKYGVGYVALSMAMGSIYIWTYVYNLMRVLTNSPIETQ
PSIESSCKVPLISSKEEEDNQKVSSLDQQLFVHQSLSFRKLIIGNGAPLGVLQDSVTLVG
DGAIPAMTLIIGGNLLKGMRSSGMKKSSIVGVLVARYIFLPISGVLIVRGAYKFDLITSE
PLYQFVLLLQYAVPPAMNLGTITQLFGAGESECSVILLWTYALASVSLTVWPTFFMWLVA


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Auxin efflux carrier family
GP000355		 Auxin efflux carrier family
2 GP015273 Unannotated cluster
3 GP040583 Unannotated cluster
4 GP463693 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Membrane transport protein
IPR004776 		Membrane transport protein Family

IPR004776
Figure 1: IPR domains for brana_pan_p002632



Represented sequence(s):
BRANA_Darmor_v8.1
BnaC02g29180.1D2
BRANA_v5.0
GSBRNA2T00083087001
GSBRNA2T00012445001
BRANA_Tapidor_v6.3
BnaC02g18200.1T
BnaA07g02680.1T
Download sequences FASTA

  1. 2. 3. 4. 5.
1. BnaC02g29180.1D2 0.00 0.28 0.46 3.11 1.41
2. BnaC02g18200.1T 0.28 0.00 0.46 3.39 0.70
3. BnaA07g02680.1T 0.46 0.46 0.00 5.64 70.99
4. GSBRNA2T00012445001 3.11 3.39 5.64 0.00 0.65
5. GSBRNA2T00083087001 1.41 0.70 70.99 0.65 0.00