Gene brana_pan_p009070


Sequence ID brana_pan_p009070  add to my list
Species Brassica napus
Alias No gene alias
Pangenome status Specific (1/3)
Length 153aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 153 amino acids

>brana_pan_p009070_BRANA
MGALNFLSGYFSDHFYVSIRKRKKRKVMQQTVNIKVKIDCDGCERKIKNAVSSMKGAKSV
EVNRKMHKVTVSGYVDPKKVLKKVQSTGKKKAELWPYVPYTMVAYPYAAGAYDKRAPPGF
VRKSEQAQAQPGGTDDKLMSLFSDENPNACTIM




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015397		 Heavy metal transport/detoxification group1
3 GP040065 Unannotated cluster
4 GP463678 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for brana_pan_p009070



Represented sequence(s):
BRANA_v5.0
GSBRNA2T00015788001
GSBRNA2T00119420001
Unrepresented genome(s):
BRANA_Darmor_v8.1
BRANA_Tapidor_v6.3
Download sequences FASTA

  1. 2.
1. GSBRNA2T00015788001 0.00 2.65
2. GSBRNA2T00119420001 2.65 0.00


Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
AT1G22990.1 orthology 0.056 2 288 6.02e-102
brarr_pan_p009918 orthology 0 1 307 2.33e-109