Gene braol_pan_p000393


Sequence ID braol_pan_p000393  add to my list
Species Brassica oleracea
Alias No gene alias
Pangenome status Core (3/3)
Length 76aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 76 amino acids

>braol_pan_p000393_BRAOL
MSQTVVLRVAMSCEGCVGAVKRVLGKMEGVESFDVDIKEQKVTVKGNVQPDAVLQTVSKT
GKKSAFWDTEAETAKA



Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323
Heavy metal transport/detoxification protein superfamily
2 GP239638 Unannotated cluster
3 GP341755 Unannotated cluster
4 GP463817 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121
Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163
Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for braol_pan_p000393



Represented sequence(s):
BRAOL_A2_v1.0
Bol005849
BRAOL_HDEM



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
AT1G66240.1 orthology 0.117 2 140 2.87e-45
brana_pan_p070944 orthology 0 1 148 1.01e-48