Gene braol_pan_p004538


Sequence ID braol_pan_p004538  add to my list
Species Brassica oleracea
Alias No gene alias
Pangenome status Dispensable (2/3)
Length 365aa



Length: 365 amino acids

>braol_pan_p004538_BRAOL
MLKLLHLFITSSKPVVEILLITSVGLYMALDGVNLLGPDARKYLNDIVFYVFNPSLVGSR
LADSVTYESLVKMWFMPINLLLTFIIGSLLGWIVILITKPPSHLRGLIVGCCDADPENCN
KYGMGYVALSMAMGSVYIWTYVYNLMRVLSNSPIETQPSIESSCKVPLISSKEEEEENHK
VGRWDRFKRRMVSLSEKVNLSTIFTPTTIAAIIALVIGLINPVRKLIIGNVAPLGVLQDS
VTLVGDGAIPATTLIIGGNLLKGMRSSGMKRSSIIGVLVARYILLPISGVLIVRGAYKLD
LITSEPLYQFVLLIQYAVPPAMSLGTITQLFGAGESECSVVMLWAYGLASVSLTAWPTFF
MWLVA


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Auxin efflux carrier family
GP000355		 Auxin efflux carrier family
2 GP015273 Unannotated cluster
3 GP040583 Unannotated cluster
4 GP463693 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Membrane transport protein
IPR004776 		Membrane transport protein Family

IPR004776
Figure 1: IPR domains for braol_pan_p004538



Represented sequence(s):
BRAOL_HDEM
BolC6p38325H
BRAOL_A2_v1.0
Bol039855
Bol039854
Unrepresented genome(s):
BRAOL_TO1000
Download sequences FASTA

  1. 2. 3.
1. Bol039854 0.00 0.73 1.10
2. Bol039855 0.73 0.00 0.36
3. BolC6p38325H 1.10 0.36 0.00