Gene braol_pan_p013733


Sequence ID braol_pan_p013733  add to my list
Species Brassica oleracea
Alias No gene alias
Pangenome status Core (3/3)
Length 371aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 371 amino acids

>braol_pan_p013733_BRAOL
EEEKKPEAAEEKKMEEKKPEEEKKEGEEKKVEADEKKGEESEKKTQEGEPTKESKDESPP
AAPEAPAPPPPPQEIVLKVYMHCEGCARKVRRCLKGFEGVEDVMTDCKSGKVVVKGEKAD
PLKVLARVQRKTHRQVVLLSPIPPPSQPPEKKAEEEKPKVEEKKVEPPVVVTVVLKVHMH
CEACATEIKKRIMRMKGVESAESDLKGSQVTVKGVFEPQKLVDYVYKRTGKHAAIMKVDP
PPPPPPEVAAAAAEGEKKEEAKGEEKDGGESKGEEGKEEKAKTDEEKKEGDGGKGEGEAA
EKGGGGETGGGGEEEEAKVVEVRKIENPYYYYLYQPPRVAVPPMEMPSYAYPHAYPPQLF
SDENPNACSIM


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015545		 Heavy metal transport/detoxification group1
3 GP040674 Unannotated cluster
4 GP070448 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for braol_pan_p013733



Represented sequence(s):
BRAOL_TO1000
NC_027750.1_cds_XP_013622158.1_16828
BRAOL_HDEM
BolC3p18545H
BRAOL_A2_v1.0
Bol019367
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
AT5G63530.1 orthology 0.0959 2 - -
brana_pan_p065969 orthology 0.0035 2 397 1.65e-137
brarr_pan_p006697 orthology 0.0138 2 342 7.07e-117