Gene braol_pan_p018575


Sequence ID braol_pan_p018575  add to my list
Species Brassica oleracea
Alias No gene alias
Pangenome status Core (3/3)
Length 154aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 154 amino acids

>braol_pan_p018575_BRAOL
MGVLDHVSEYFDCSSHGSSKRHKSLQTVDVRVLIDCEGCERKVRRALERMKGVRDVTIEA
NAQKVTVVGYVEPNRVVARIIHRTGKRAELYPFVPYDVVAHPYASGVYDNRAPVGYVRNT
EYDPHVSRLARASSTEVRYTTAFSDENASGCVIM


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015397		 Heavy metal transport/detoxification group1
3 GP040065 Unannotated cluster
4 GP463617 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for braol_pan_p018575



Represented sequence(s):
BRAOL_HDEM
BolC3p20813H
BRAOL_TO1000
NC_027750.1_cds_XP_013629330.1_18647
BRAOL_A2_v1.0
Bol034644
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
AT4G35060.1 orthology 0.0529 3 - -
brana_pan_p016784 orthology 0.0068 1 310 1.88e-110
brarr_pan_p020274 orthology 0.0131 2 308 8.78e-110