Gene braol_pan_p019160


Sequence ID braol_pan_p019160  add to my list
Species Brassica oleracea
Alias No gene alias
Pangenome status Core (3/3)
Length 171aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 171 amino acids

>braol_pan_p019160_BRAOL
MLKRMTKKSDVVPEKNGQSNIVPKKEANPEIKQTDDKPERSIREVEYNLRPASQELEVYI
RKVISKFEGVENCVVDIQNKRIVVTGDFDQKKLFEKLQKKRRKIIKKDHELIEKYRSIHA
RVRSGDEKEMAKFDMSNEENPNGALYLFLLFIFVFFIFCIFYLFIHIAVET


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP246754 Unannotated cluster
3 GP351161 Unannotated cluster
4 GP480573 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for braol_pan_p019160



Represented sequence(s):
BRAOL_A2_v1.0
Bol045467
BRAOL_TO1000
NC_027755.1_cds_XP_013601682.1_45525
BRAOL_HDEM
BolC8p50821H
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
brana_pan_p018519 orthology 0.0879 2 262 8.8e-91
brarr_pan_p037797 orthology 0.0879 2 262 7.11e-91