Gene braol_pan_p022609


Sequence ID braol_pan_p022609  add to my list
Species Brassica oleracea
Alias No gene alias
Pangenome status Core (3/3)
Length 307aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 307 amino acids

>braol_pan_p022609_BRAOL
MGEEVKPEEKEAVSAPEAVPEPASAEDEKKDVAEEKQAATEEENPTVEEEPQPPPPPPPF
ILYVDLHCVGCAKKIQRSILKIRGVEEVVMDMNENQVTVKGVLDPQAVCNKIKKKTKRMA
KVLSPLPAAEGEPLPPVITSQVSGLTTVELSVNMHCQACADQLKKKILKMRGVQTTVTEH
TNGKVIVTGTMDEEKLVDYVYRRTKKQARIVPQPDPEPEKTEVEEEKKEKSGEGGEEPAE
TGEEKEAGDEKVEDGGGEEMEASEEMRVWEEEGMKRMMYYYQPSYVIERVPPPQLFSDEN
PNACSIS


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015545		 Heavy metal transport/detoxification group1
3 GP126431 Unannotated cluster
4 GP077890 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for braol_pan_p022609



Represented sequence(s):
BRAOL_TO1000
NC_027754.1_cds_XP_013595538.1_39957
BRAOL_HDEM
BolC7p44840H
BRAOL_A2_v1.0
Bol022416
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
AT5G24580.1 orthology 0.137 2 - -
brana_pan_p022238 orthology 0.0212 2 355 1.6e-123
brarr_pan_p028152 orthology 0.0283 2 412 1.26e-145