Gene braol_pan_p024061


Sequence ID braol_pan_p024061  add to my list
Species Brassica oleracea
Alias No gene alias
Pangenome status Core (3/3)
Length 296aa



Length: 296 amino acids

>braol_pan_p024061_BRAOL
ISLSSSLLNHDEMNMIDENGAASDSEAESLSDSDDNDITEKLSEPTKTAVYNRDGLLDKL
QDISWPEDIDWTHKLTVEIEQGQAVDVNDDLAREMAFYTQALQGTRQAFQKLQEMGLPFL
RPADYYAEMVKSDTHMEKVKSKLLCEKKQMEEMEERRKARDNKKMAKEVQSQKMKERAKQ
KKDEIESVKKWRKQRQQSGFSEKGGAGELDLEFGNGKSFQRGGGGKKRPGVSPGDRSGGK
GKAASRMNNKKRQFRDSKFGHGGRKGLSKQNTAETTNDFKGGFRGGKAGGNKRQKR


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Unknown function duf1138 family
GP002478		 Unknown function duf1138 family
2 GP018276 Unannotated cluster
3 GP042981 Unannotated cluster
4 GP075980 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Eukaryotic rRNA processing
IPR008610 		Eukaryotic rRNA processing Family

IPR008610
Figure 1: IPR domains for braol_pan_p024061



Represented sequence(s):
BRAOL_TO1000
NC_027748.1_cds_XP_013632173.1_3755
BRAOL_A2_v1.0
Bol023275
BRAOL_HDEM
BolC1p04121H
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
AT3G22660.1 orthology 0.183 3 - -
PGSC0003DMP400055292 orthology 0.627 7 - -
PGSC0003DMP400055391 orthology 0.611 7 - -
Solyc01g006090.2.1 orthology 0.625 7 - -
Solyc01g006170.2.1 orthology 0.609 6 - -
brana_pan_p007884 orthology 0.0602 1 472 8.44e-170
brarr_pan_p031703 orthology 0.0541 2 483 3.85e-174
capan_pan_p017109 orthology 0.707 6 165 8.29e-50
ipotf_pan_p017885 orthology 0.613 6 - -
ipotf_pan_p024335 orthology 0.888 5 - -
ipotf_pan_p027028 orthology 0.656 5 - -
itb11g17740.t1 orthology 0.605 5 - -
itb12g07110.t1 orthology 0.61 6 - -