Gene braol_pan_p030426
Sequence ID | braol_pan_p030426 add to my list |
---|---|
Species | Brassica oleracea |
Alias | No gene alias |
Pangenome status | Core (3/3) |
Length | 294aa |
Length: 294 amino acids
>braol_pan_p030426_BRAOL MSFEDDFVEDDEMNMIDEDVASDSEAESLSDSDSENAITEKLPEPTKTAVYNRDGLLDKL QDISWPEDADWTHKLTVEIEQGQAVDVNDDLAREMAFYTQALEGTRQAFEKLQEMGLPFL RPADYYAEMVKSDTHMEKVKSKLLYEKKQMEESEERRKARDNKKMAKEVQSQKMKERAKQ KKDEIESVKKWRKQRQQSGFSEKGAGELDLEFGNGKSFQRGGGKKRPGVSPGDRSGGKGK PTSRMNNKKREFRDSKFGHGGRKGLSKQNTAETTNDFKGGFRGGKAGGNKRQKR
Multiple alignment used to build consensus sequence:
Clustering Level | Family ID | Family Name |
---|---|---|
1 | Unknown function duf1138 family
GP002478 |
Unknown function duf1138 family |
2 | GP018276 | Unannotated cluster |
3 | GP042981 | Unannotated cluster |
4 | GP075980 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
ID | Name | Type |
---|---|---|
Eukaryotic rRNA processing
IPR008610
|
Eukaryotic rRNA processing | Family |
Figure 1: IPR domains for braol_pan_p030426
Represented sequence(s):
Homology | RBH | ||||
---|---|---|---|---|---|
Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
AT3G22660.1 | orthology | 0.143 | 2 | - | - |
PGSC0003DMP400055292 | orthology | 0.587 | 6 | - | - |
PGSC0003DMP400055391 | orthology | 0.571 | 6 | - | - |
Solyc01g006090.2.1 | orthology | 0.585 | 6 | - | - |
Solyc01g006170.2.1 | orthology | 0.569 | 5 | - | - |
brana_pan_p006433 | orthology | 0.001 | 1 | 451 | 1.53e-161 |
capan_pan_p017109 | orthology | 0.666 | 5 | - | - |
ipotf_pan_p017885 | orthology | 0.572 | 5 | 228 | 5.8e-74 |
ipotf_pan_p024335 | orthology | 0.847 | 4 | - | - |
ipotf_pan_p027028 | orthology | 0.616 | 4 | - | - |
itb11g17740.t1 | orthology | 0.565 | 4 | - | - |
itb12g07110.t1 | orthology | 0.57 | 5 | 228 | 6.27e-74 |