Gene braol_pan_p031365


Sequence ID braol_pan_p031365  add to my list
Species Brassica oleracea
Alias No gene alias
Pangenome status Dispensable (2/3)
Length 388aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 388 amino acids

>braol_pan_p031365_BRAOL
MGEEEKKQEAPEEKKMEEKKPEEEKKEEGKKVEADEKKGEDSEKKTQEGEAPKDSKEDSP
PAAPEAPAPPPPPQEIVLKVYMHCEGCARKVRRCLKGFEGVEDVTTDCKAGKVVVKGEKA
DPLKVLARVQRKTHREVVLLSPIPPPSQPPEKKGEEEKPKVEEKKVEPPVVVTVVIKVHM
HCEACATEIKKRIMRMKGVESAESDLKASQVTVKGVFEPQKLVEYVYKRTGKHAAIMKID
PPPPPPPEEAAAAAEAEKKEEGKGENGGGESKGEEGKDEKAKTDEEKKEGDGSKGEGEAG
ENGGGGEEEGKVVEVKKIENPYFYYHYQPPRVAMPPYAYPHAYPPHAYPPQAYPPHAYPH
AYPSNAYPPNAYPPQIFSDENPNACSIM


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015545		 Heavy metal transport/detoxification group1
3 GP040674 Unannotated cluster
4 GP070448 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for braol_pan_p031365



Represented sequence(s):
BRAOL_HDEM
BolC2p12352H
BRAOL_TO1000
NC_027749.1_cds_XP_013612767.1_10707
Unrepresented genome(s):
BRAOL_A2_v1.0
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
AT5G63530.1 orthology 0.124 3 - -
brana_pan_p027602 orthology 0.0011 1 365 2.71e-124
brarr_pan_p014872 orthology 0.0253 2 314 1.75e-105