Gene braol_pan_p031579


Sequence ID braol_pan_p031579  add to my list
Species Brassica oleracea
Alias No gene alias
Pangenome status Dispensable (2/3)
Length 562aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 562 amino acids

>braol_pan_p031579_BRAOL
MNKQDVMKLQTCVLKVNVHCEGCKHKVKKQLQKIEGVYSVKADVEQGKVTVTGNVDPALL
VKKLSKSGKHAEIIGGGGGGGGGKGFPNLNGQFGNLSMSGNGKGKGGKESNQVKGKGNGG
GGGQNQGHGGQPMQLTPQQIQQMMMMKAAQGGSGGGGKDMKMMMPPVASKDQKKSVKFAE
EDDEFSDDYDDEFSEDDYDDDEFDDEDGEMGGHGHGAGGGNHHMPPNKTMMMPNKMPQMG
QHGGGPKGPNEIMMMMNGFKPGGGGGGGGAGKKGGGGGGGFEIPVQMKGMGEGKKGGEKG
KKEGKDKKGGGGKTGKTDAKSGGGLLGFFKNVKSGKGDEKKGGGKKEGGGGGDKVKSSGG
GVHHYDSGPKKGGGKSKGGAHGAHDIDDLIKHNKAGGGGNKGNHSAKGMMGGPMGQGAPM
GMMGQGGPMGQGGPMSMMGQGGPMGMMGQGGPMGHQGGSYPAVQGLPMSGGGYYPPPPQA
NHQMNQQQYMQMMMHQQQQQQQAAAAHGGYGGGHGGDMYHQMMYARPYPAVNYAHPPPMP
PPHSGPYSDMFSDENPAGCSIM


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP023608 Unannotated cluster
3 GP040483 Unannotated cluster
4 GP070015 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for braol_pan_p031579



Represented sequence(s):
BRAOL_TO1000
NC_027748.1_cds_XP_013626732.1_5097
BRAOL_HDEM
BolC1p05705H
Unrepresented genome(s):
BRAOL_A2_v1.0
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
brana_pan_p011549 orthology 0.0078 1 545 3.25e-190