Gene braol_pan_p031860


Sequence ID braol_pan_p031860  add to my list
Species Brassica oleracea
Alias No gene alias
Pangenome status Core (3/3)
Length 166aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 166 amino acids

>braol_pan_p031860_BRAOL
MSQTVVLKVGMSCQGCVGAVNRVLGKMEGVESFDIDIKEQKVTVKGKVEPEAVFQTVSKT
GKKTSYWPVEAEAEPNAEAEPKVETETKPEAETKTEGKVVEVLGAKVDATKVEPEADVEP
KLAETETKTEGKADDEVLDAKVDPKVDAKADVEQKLVEAETKPPQV


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP239638 Unannotated cluster
3 GP341755 Unannotated cluster
4 GP463817 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for braol_pan_p031860



Represented sequence(s):
BRAOL_HDEM
BolC4p25167H
BRAOL_A2_v1.0
Bol044257
BRAOL_TO1000
NC_027751.1_cds_XP_013633622.1_22411
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
AT3G56240.1 orthology 0.231 2 - -
brana_pan_p026835 orthology 0.0064 1 190 2.04e-62