Gene braol_pan_p032933


Sequence ID braol_pan_p032933  add to my list
Species Brassica oleracea
Alias No gene alias
Pangenome status Core (3/3)
Length 149aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 149 amino acids

>braol_pan_p032933_BRAOL
MGAFDYISSFCSYTYSNAKTKRKPLQTVEIKVKMDCDGCERRLRNVVRRMKGVKTVEVNR
KQSRLTVNGHVDPNKVLKRVKSTGKKAEFWPYIPQHMVYYPFAPGMYDKRAPAGHIRNPT
QAFPAANAPGENYVSLFSDDNVHAACSIM


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015397		 Heavy metal transport/detoxification group1
3 GP040065 Unannotated cluster
4 GP463678 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for braol_pan_p032933



Represented sequence(s):
BRAOL_TO1000
NC_027756.1_cds_XP_013609222.1_52881
BRAOL_HDEM
BolC9p58808H
BRAOL_A2_v1.0
Bol019801
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
brana_pan_p014674 orthology 0.0519 2 - -
brana_pan_p038693 orthology 0.0021 2 - -
brarr_pan_p002405 orthology 0.0076 1 305 9.99e-109