Gene braol_pan_p033160
| Sequence ID | braol_pan_p033160 add to my list |
|---|---|
| Species | Brassica oleracea |
| Alias | No gene alias |
| Pangenome status | Core (3/3) |
| Length | 393aa |
Length: 393 amino acids
>braol_pan_p033160_BRAOL MGFWSLLEVASMPVIQVLFISVVGAFLATDRCKLFPVEARNSMNKVVFVLFAPALMFANL AQTVTLEDMISWWFMPVNMGLTFLLGGILGWIVVKILKPPPYLEGLIVATCSSGNMGNLP IILVPAICDEDKSPFGNRSVCRTVGLSYASFSMALGGFYIWTYTFRLIKGSAMKFKDIEE SEQKAIRSSNSDLEADHKSHLLGAPEETLVKQETGFWRKGVDFLHEILEELRAPPSVGAI IGFIFGAVTWLRNLIIGDDAPLRIVQTTAKLLGDGTIPCMTIILGGNLIQGLRSSAVKPV VVLGIVCVRYILLPIIGIGIVKSAESFGFLPADPLFQYVLMLQFTLPPAMNIGTMTQLYN VGQDECSVLMLWTYLVAILALTVWSTIFLHLLV
Multiple alignment used to build consensus sequence:
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Auxin efflux carrier family
GP000355 |
Auxin efflux carrier family |
| 2 | GP015273 | Unannotated cluster |
| 3 | GP040583 | Unannotated cluster |
| 4 | GP463648 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Membrane transport protein
IPR004776
|
Membrane transport protein | Family |
Figure 1: IPR domains for braol_pan_p033160
Represented sequence(s):
BRAOL_A2_v1.0
BRAOL_HDEM
BRAOL_TO1000
| 1. | 2. | 3. | 4. | |
|---|---|---|---|---|
| 1. Bol017670 | 0.00 | -0.00 | 0.25 | 0.25 |
| 2. BolC7p40978H | -0.00 | 0.00 | 0.25 | 0.25 |
| 3. NC_027754.1_cds_XP_013596152.1_36668 | 0.25 | 0.25 | 0.00 | -0.00 |
| 4. NC_027754.1_cds_XP_013596153.1_36669 | 0.25 | 0.25 | -0.00 | 0.00 |