Gene braol_pan_p033745


Sequence ID braol_pan_p033745  add to my list
Species Brassica oleracea
Alias No gene alias
Pangenome status Core (3/3)
Length 77aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 77 amino acids

>braol_pan_p033745_BRAOL
MSQTVVLKVAMPCEGCVGAVKRVLGKMQGVESFDVDLKEQKVTVKGNVEPEAVLQTVSKT
GKKTSFWGADEAETAKA



Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323
Heavy metal transport/detoxification protein superfamily
2 GP239638 Unannotated cluster
3 GP341755 Unannotated cluster
4 GP463817 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121
Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163
Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for braol_pan_p033745



Represented sequence(s):
BRAOL_A2_v1.0
Bol024450
BRAOL_HDEM



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
brarr_pan_p000759 orthology 0 1 151 7.49e-50