Gene braol_pan_p038631


Sequence ID braol_pan_p038631  add to my list
Species Brassica oleracea
Alias No gene alias
Pangenome status Core (3/3)
Length 112aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 112 amino acids

>braol_pan_p038631_BRAOL
MSEKQRQCCVVMRINLDCNACCRKVRRIVINMKGIDTHMIEKKEDRIIVCGRFRPSDVVV
KLQKKMKRRVEILEVGDLTGREEGFHDHETPYEPEHEYSEQQPDHMTMPLLF


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP109350 Unannotated cluster
3 GP119142 Unannotated cluster
4 GP077996 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR036163
Figure 1: IPR domains for braol_pan_p038631



Represented sequence(s):
BRAOL_HDEM
BolC7p44019H
BRAOL_A2_v1.0
Bol042764
BRAOL_TO1000
NC_027754.1_cds_XP_013596915.1_39036
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
AT3G25855.1 orthology 0.283 2 - -
Cg7g014560.1 orthology 0.986 6 - -
Cm038010.1 orthology 0.986 7 - -
Cs7g13150.1 orthology 0.986 7 - -
FvH4_4g27630.1 orthology 1 5 - -
Manes.06G070100.1 orthology 0.848 3 - -
Manes.14G100500.1 orthology 0.77 3 - -
brana_pan_p048851 orthology 0.0463 2 218 2.33e-75
brarr_pan_p017699 orthology 0.064 2 213 1.81e-73
maldo_pan_p037558 orthology 1 5 - -
maldo_pan_p044634 orthology 1 5 - -
maldo_pan_p046030 orthology 1 5 - -
maldo_pan_p049521 orthology 1 5 - -
maldo_pan_p049537 orthology 1 5 - -
maldo_pan_p055366 orthology 1 5 - -