Gene capan_pan_p006811


Sequence ID capan_pan_p006811  add to my list
Species Capsicum annuum
Alias No gene alias
Pangenome status Core (3/3)
Length 204aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 204 amino acids

>capan_pan_p006811_CAPAN
MIDMVQNQVMIDGVIEPQAVCASIVKKTKRVAKILSPPAQGEDEPICEVVASEVSRLTTV
ELIVNMHCEACAKQLKRKVLQMRGVRTAETYLSLGKVIVTGSINANKLVDYVYRRTKKQA
KVVLQPEPWKPTEEPKSEDPNSNRDEEAKKLEEEEKNEDRKDGKKASEGEEEIINKMMYY
SQPLNVIERSIPPPQSSPLLRRKS


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015545		 Heavy metal transport/detoxification group1
3 GP126431 Unannotated cluster
4 GP077890 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for capan_pan_p006811



Represented sequence(s):
CAPAN_Zunla_1_v2.0
Capana06g000750
CAPAN_Glabriusculum_Chiltepin_v2.0
Capang06g000702
CAPAN_CM334_v2.0
CA.PGAv.1.6.scaffold65.150
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
HanXRQChr14g0448911 orthology 1 2 - -
PGSC0003DMP400046920 orthology 0.225 2 - -
Solyc06g073070.1.1 orthology 0.374 2 - -