Gene capan_pan_p009765


Sequence ID capan_pan_p009765  add to my list
Species Capsicum annuum
Alias No gene alias
Pangenome status Dispensable (2/3)
Length 326aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 326 amino acids

>capan_pan_p009765_CAPAN
MGEEEKKSEEAKKDDPPKDEKTSVGEEKKEEKKVEEESKEAKPEPPPPPPPPPEIVLRVF
MHCEGCARKVRKSLKGFQGVEDVLTDCKTHKVVVKGEKADPLKVLERIQKKSHRQVELLS
PIPKPAPPPAEETKKAEEKEAVKPEEKKEEPQVITVVLKVHMHCEACAQEIKKRVENAEP
DLKNSQVTVKGAFEATKLVEYVSKRTGKQAVIVKVEPEKKAEEEREPKEDKKAEKKTDEK
EAKKAEEGDKKEEKKEEAAPPAAAKEETVQNDADPKLDVKKNEFYYYHHPQNHQLYNPQR
FAHEMHEYPPPPQIFSDENPNACSVM


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015545		 Heavy metal transport/detoxification group1
3 GP040674 Unannotated cluster
4 GP070448 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for capan_pan_p009765



Represented sequence(s):
CAPAN_Glabriusculum_Chiltepin_v2.0
Capang06g000737
CAPAN_Zunla_1_v2.0
Capana06g000782
Unrepresented genome(s):
CAPAN_CM334_v2.0
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
PGSC0003DMP400046761 orthology 0.112 2 349 2.43e-120
Solyc06g072700.2.1 orthology 0.099 2 347 1.48e-119
capan_pan_p035442 ultra-paralogy 0.0324 0 - -
ipotf_pan_p012033 orthology 0.466 3 - -
ipotf_pan_p015819 orthology 0.479 3 - -
itb02g17790.t1 orthology 0.455 3 - -
itb11g13550.t1 orthology 0.499 3 - -