Gene capan_pan_p015895
Sequence ID | capan_pan_p015895 add to my list | ||
---|---|---|---|
Species | Capsicum annuum | ||
Alias | No gene alias | ||
Pangenome status | Core (3/3) | ||
Length | 147aa | ||
Gene Ontology |
Display term(s) (1)
|
Length: 147 amino acids
>capan_pan_p015895_CAPAN SCILKVDVHCDACKMKLVDVLSSVCGVYALTINAEKGEVNVCGEVNPNLLVKALKETGKH AEIVHVKLKHPSLTTPTSRYLPYNGYGYGHGHGHGPGHGYCYGHGYGYDYGHGYGQTMPM SSYNYSMRRPLMMEQPHYYGHVSSHPR
Multiple alignment used to build consensus sequence:
Clustering Level | Family ID | Family Name |
---|---|---|
1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
2 | GP241299 | Unannotated cluster |
3 | GP128139 | Unannotated cluster |
4 | GP139101 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
ID | Name | Type |
---|---|---|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for capan_pan_p015895
Represented sequence(s):
CAPAN_Glabriusculum_Chiltepin_v2.0
CAPAN_Zunla_1_v2.0
CAPAN_CM334_v2.0
Homology | RBH | ||||
---|---|---|---|---|---|
Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
Solyc09g064730.2.1 | orthology | 0.191 | 1 | 194 | 1.36e-64 |
ipotf_pan_p031383 | orthology | 1 | 3 | - | - |
medtr_pan_p032119 | orthology | 1 | 2 | - | - |