Gene capan_pan_p020758


Sequence ID capan_pan_p020758  add to my list
Species Capsicum annuum
Alias No gene alias
Pangenome status Core (3/3)
Length 367aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 367 amino acids

>capan_pan_p020758_CAPAN
MAAQDRPEDPPVLLNYKTWVLKVSIHCEGCKRKVKKILQQVPGVYAIDIDLKQQKATVTG
NVEPEALLRKLHKSGKHAELVPQQTDHKEKKSAKSKKKEKETDPQSKASAASTSQPHTKS
TGKTVLPKEPSAKIEDASREVPQKSEESSTGPAKPEEETASGSADEPAAPKEKTDETVKE
EKSEGKKPVTDTAGKQQIPEAAAEKKVTESDNNASASAEKSGGGPVSEASGSVGKKKKKK
GQNSNNAEGTTPTPSIVLPAGPVFEHHNMGPQVSAPTNEIPPRQPGYHYYPQFYVPQPAY
VVSYNTAQPTSSYTASYYAPAPPTSYAYTYSGPVAEPPPSDVDTYPRQPLDSFEMFSDEN
PNGCFIM



Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323
Heavy metal transport/detoxification protein superfamily
2 GP023608 Unannotated cluster
3 GP040483 Unannotated cluster
4 GP070015 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121
Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163
Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for capan_pan_p020758



Represented sequence(s):
CAPAN_CM334_v2.0
CAPAN_Glabriusculum_Chiltepin_v2.0
CAPAN_Zunla_1_v2.0



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Oeu030336.1 orthology 0.809 3 143 6e-39
PGSC0003DMP400042886 orthology 0.169 2 415 3.57e-145
Solyc01g099600.2.1 orthology 0.177 2 413 3.21e-144
itb06g13990.t1 orthology 1 3 - -