Gene capan_pan_p020758
| Sequence ID | capan_pan_p020758 add to my list | ||
|---|---|---|---|
| Species | Capsicum annuum | ||
| Alias | No gene alias | ||
| Pangenome status | Core (3/3) | ||
| Length | 367aa | ||
| Gene Ontology |
 Display term(s) (1)
|
Length: 367 amino acids
>capan_pan_p020758_CAPAN MAAQDRPEDPPVLLNYKTWVLKVSIHCEGCKRKVKKILQQVPGVYAIDIDLKQQKATVTG NVEPEALLRKLHKSGKHAELVPQQTDHKEKKSAKSKKKEKETDPQSKASAASTSQPHTKS TGKTVLPKEPSAKIEDASREVPQKSEESSTGPAKPEEETASGSADEPAAPKEKTDETVKE EKSEGKKPVTDTAGKQQIPEAAAEKKVTESDNNASASAEKSGGGPVSEASGSVGKKKKKK GQNSNNAEGTTPTPSIVLPAGPVFEHHNMGPQVSAPTNEIPPRQPGYHYYPQFYVPQPAY VVSYNTAQPTSSYTASYYAPAPPTSYAYTYSGPVAEPPPSDVDTYPRQPLDSFEMFSDEN PNGCFIM
Multiple alignment used to build consensus sequence:
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
| 2 | GP023608 | Unannotated cluster |
| 3 | GP040483 | Unannotated cluster |
| 4 | GP070015 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
|
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for capan_pan_p020758
Represented sequence(s):
CAPAN_CM334_v2.0
CAPAN_Glabriusculum_Chiltepin_v2.0
CAPAN_Zunla_1_v2.0
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| Oeu030336.1 | orthology | 0.809 | 3 | 143 | 6e-39 |
| PGSC0003DMP400042886 | orthology | 0.169 | 2 | 415 | 3.57e-145 |
| Solyc01g099600.2.1 | orthology | 0.177 | 2 | 413 | 3.21e-144 |
| itb06g13990.t1 | orthology | 1 | 3 | - | - |