Gene capan_pan_p020792


Sequence ID capan_pan_p020792  add to my list
Species Capsicum annuum
Alias No gene alias
Pangenome status Core (3/3)
Length 275aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 275 amino acids

>capan_pan_p020792_CAPAN
MGKKKNRKNAEGELMMKNVEGEMMKSEEQQVENEVGGKTEEANNRSVVLKLDLHCEGCVR
RIIKAVRSFKGVEKVTCDGDTNKVTAIGEVDALKLKERVEKKLKRPVQLIYPLQKDCKKE
KQKNEKGTNGEDKKAKEKEPPVTTAVLKVHLHCEGCIKKIQKIITNNKGYKEMKMDFEKD
LVTVTGAMDMKELVEALKKQGKKEVQIVPPKKEKEGGEKQDGGGGGKRKGKEKDGQGGGD
GGDKQVQYEHQDMEATAVYVTQMLSDENTNACSIM


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015545		 Heavy metal transport/detoxification group1
3 GP040674 Unannotated cluster
4 GP071484 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for capan_pan_p020792



Represented sequence(s):
CAPAN_Glabriusculum_Chiltepin_v2.0
Capang00g003867
CAPAN_Zunla_1_v2.0
Capana06g000522
CAPAN_CM334_v2.0
CA.PGAv.1.6.scaffold1755.8
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
PGSC0003DMP400012653 orthology 0.315 2 297 7.84e-102
Solyc06g074930.1.1 orthology 0.319 2 271 2.66e-91