Gene capan_pan_p023481


Sequence ID capan_pan_p023481  add to my list
Species Capsicum annuum
Alias No gene alias
Pangenome status Core (3/3)
Length 313aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 313 amino acids

>capan_pan_p023481_CAPAN
MGEAEEVKKPEEEKKEEAPPNEEGKTEESKDASPPPPQEIILRVYMHCEGCARKVRRSLK
GFQGVEDVMTDCRSHKVVVKGEKADPLKVLERVQKKSHRQVELLSPIPKPPAEEPKKMEK
KEVIKPQEKKEEPKVIIVVLKVHMHCEACAQEIKRRIQKMKGVENAEPDLKNSQVTVKGV
FEAAQLVEYVSKRTGKRAVIVKVEPEKKEEEAKPKEGNEEKKAEEIEKDAKKAEEGEKKE
EGGGSGDGASSGKEVAVQEEDPKLEMKKNEFYYYYPQQNYYQLYPQRYAHEMYYNPYPPQ
MFSDENPNACSVM


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015545		 Heavy metal transport/detoxification group1
3 GP040674 Unannotated cluster
4 GP070448 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for capan_pan_p023481



Represented sequence(s):
CAPAN_Zunla_1_v2.0
Capana03g001692
CAPAN_CM334_v2.0
CA.PGAv.1.6.scaffold732.27
CAPAN_Glabriusculum_Chiltepin_v2.0
Capang03g001634
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
PGSC0003DMP400045992 orthology 0.156 2 313 2.21e-106
Solyc03g097380.2.1 orthology 0.16 2 300 3.51e-101
ipotf_pan_p012033 orthology 0.4 3 - -
ipotf_pan_p015819 orthology 0.413 3 259 1.84e-85
itb02g17790.t1 orthology 0.389 3 - -
itb11g13550.t1 orthology 0.433 3 253 9.37e-83