Gene capan_pan_p029057
Sequence ID | capan_pan_p029057 add to my list | ||
---|---|---|---|
Species | Capsicum annuum | ||
Alias | No gene alias | ||
Pangenome status | Core (3/3) | ||
Length | 451aa | ||
Gene Ontology |
Display term(s) (1)
|
Length: 451 amino acids
>capan_pan_p029057_CAPAN MASKSTEPEEKKAKVMNKVERYNVCNNPNTTMVARMYNRNNSNKDYGVTMHNHCYYGQSK ENRKMKGKGVAEDKSAGGGKNGDVDGITTILLKLDWHCEECAEKVRRYVGDFEGVENVKA DYDTGKLIVKGNVDPLWLRDTLEGETNWKVELLSAQPKHDCRSSSGIGEKKPDAKVERKA EENKAEDKKPKKVLFNTKVVRVHCDGSTQRVKRFVMKELAPYLKPKFKRKVEGGSGGHSD KEKEKEVVCGGCGDDSDGRKKKDGESKVASKITEPKEKKAEATNKMEYYSGCSCPNTYNA KPPMYNHNYYNQDYGVTMHDHGYSGRTGYIPPPPYFITPRDHGYGRRTGHVSPPYFITPH NHGYYHRTGNVSPQHFTTPRDHGYGHRTGYISPRHFTTPRNHGYGHSSYVSPPYLLTTQH DIGYGHSGYVPPPYTAPQCFNDENPNACSVM
Multiple alignment used to build consensus sequence:
Clustering Level | Family ID | Family Name |
---|---|---|
1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
2 | GP251367 | Unannotated cluster |
3 | GP358076 | Unannotated cluster |
4 | GP537584 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
ID | Name | Type |
---|---|---|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for capan_pan_p029057
Represented sequence(s):
CAPAN_Zunla_1_v2.0
CAPAN_CM334_v2.0
CAPAN_Glabriusculum_Chiltepin_v2.0
Homology | RBH | ||||
---|---|---|---|---|---|
Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
Mba01_g11900.1 | orthology | 1 | 3 | - | - |
PGSC0003DMP400048991 | orthology | 0.406 | 2 | 219 | 1.78e-67 |
Solyc10g084000.1.1 | orthology | 0.479 | 2 | 193 | 1.85e-57 |
musac_pan_p020675 | orthology | 1 | 3 | - | - |