Gene capan_pan_p032441


Sequence ID capan_pan_p032441  add to my list
Species Capsicum annuum
Alias No gene alias
Pangenome status Specific (1/3)
Length 70aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 70 amino acids

>capan_pan_p032441_CAPAN
VVELKVGLHCDECIKKILKAIKKIEDIETYDVDTQLNKVIVTGNVTTEKVIKVLHKIGKQ
ASNWDHQSSY




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP240412 Unannotated cluster
3 GP342479 Unannotated cluster
4 GP464531 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for capan_pan_p032441



Represented sequence(s):
CAPAN_CM334_v2.0
CA.PGAv.1.6.scaffold865.11
Unrepresented genome(s):
CAPAN_Glabriusculum_Chiltepin_v2.0
CAPAN_Zunla_1_v2.0


Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Cc02_g05820 orthology 0.257 2 119 1.78e-37
DCAR_024797 orthology 0.557 3 111 1.37e-33
HanXRQChr08g0222621 orthology 0.345 3 112 9.81e-35
HanXRQChr15g0493871 orthology 0.392 3 - -
PGSC0003DMP400041420 orthology 0.0797 3 130 6.07e-42
Solyc06g050710.2.1 orthology 0.116 4 126 2.89e-40
ipotf_pan_p010921 orthology 0.401 5 108 1.99e-33
ipotf_pan_p028107 orthology 0.401 5 - -
itb12g24140.t1 orthology 0.401 5 108 2.14e-33