Gene cicar_pan_p010222
| Sequence ID | cicar_pan_p010222 add to my list | ||
|---|---|---|---|
| Species | Cicer arietinum | ||
| Alias | No gene alias | ||
| Pangenome status | Core (2/2) | ||
| Length | 324aa | ||
| Gene Ontology |
 Display term(s) (1)
|
Length: 324 amino acids
>cicar_pan_p010222_CICAR MGEEEKKPEENKVEEKKPEEEPKKEEEKKETQEGDGKPTAEEKKPEESTNETAPPPEIVL KVFMHCEGCARKVRRSLKGFSGVEDVVTDCKSHKVVVKGEKADPLKVLERVQRKSHRQVE LLSPIPKPPTEDEKKSEENEKPKPEEEKKEEPQITTVILKVHMHCEACSQEIKKRIERIK GVESAEPDLKNSLVTVKGVLETEKLVEYVYKRTGKQAVIVKQEPEKKEEAKETKEEEKKT EENEKDQKKSGEGEEKKEAVEGDGEKSGGDGGGAEETKVVEMKKNEYYYKYGTEVFAYPD PAYPLQAYPPQIFSDENPNACSVM
Multiple alignment used to build consensus sequence:
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
| 2 | Heavy metal transport/detoxification group1
GP015545 |
Heavy metal transport/detoxification group1 |
| 3 | GP040674 | Unannotated cluster |
| 4 | GP070448 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
|
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for cicar_pan_p010222
Represented sequence(s):
CICAR_ICC_4958_desi
CICAR_CDC_Frontier_kabuli
| 1. | 2. | 3. | |
|---|---|---|---|
| 1. cicar.CDCFrontier.gnm1.ann1.Ca_05708.1 | 0.00 | -0.00 | -0.00 |
| 2. cicar.CDCFrontier.gnm1.ann1.Ca_05709.1 | -0.00 | 0.00 | -0.00 |
| 3. cicar.ICC4958.gnm2.ann1.Ca_15785.1 | -0.00 | -0.00 | 0.00 |
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| medtr_pan_p015629 | orthology | 0.156 | 1 | 342 | 6.83e-118 |