Gene cicar_pan_p014790


Sequence ID cicar_pan_p014790  add to my list
Species Cicer arietinum
Alias No gene alias
Pangenome status Core (2/2)
Length 246aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 246 amino acids

>cicar_pan_p014790_CICAR
MDAKPSSEPLKYQTWFLKVSIHCEGCRRKVKKVLKSIDGVFTATIDSQQQKVTVTGNVGV
ETLLRKLVRAGKHAEVWPENISGNNNGNKKKNNKNEAKLPVKSPAGDHVPPVTGRSDGCG
GGSDKKKKKKDGGIGSNGLSTTVAKSGPAHTGLQFQNLGQMNLSPTRQQSLLYPPETCYP
PAPMVYVSAYNRGYPMGRVGDLSYFVPPSPYTCHGLDQHATYQFQSGPFVSFEIFSDENA
NGCSIM



Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323
Heavy metal transport/detoxification protein superfamily
2 GP023608 Unannotated cluster
3 GP040483 Unannotated cluster
4 GP070015 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121
Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163
Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for cicar_pan_p014790



Represented sequence(s):
CICAR_CDC_Frontier_kabuli
CICAR_ICC_4958_desi



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
medtr_pan_p018238 orthology 0.231 1 304 1.52e-103
vitvi_pan_p015057 orthology 1 2 139 3.21e-40
vitvi_pan_p035873 orthology 1 2 - -