Gene cicar_pan_p014790
| Sequence ID | cicar_pan_p014790 add to my list | ||
|---|---|---|---|
| Species | Cicer arietinum | ||
| Alias | No gene alias | ||
| Pangenome status | Core (2/2) | ||
| Length | 246aa | ||
| Gene Ontology |
 Display term(s) (1)
|
Length: 246 amino acids
>cicar_pan_p014790_CICAR MDAKPSSEPLKYQTWFLKVSIHCEGCRRKVKKVLKSIDGVFTATIDSQQQKVTVTGNVGV ETLLRKLVRAGKHAEVWPENISGNNNGNKKKNNKNEAKLPVKSPAGDHVPPVTGRSDGCG GGSDKKKKKKDGGIGSNGLSTTVAKSGPAHTGLQFQNLGQMNLSPTRQQSLLYPPETCYP PAPMVYVSAYNRGYPMGRVGDLSYFVPPSPYTCHGLDQHATYQFQSGPFVSFEIFSDENA NGCSIM
Multiple alignment used to build consensus sequence:
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
| 2 | GP023608 | Unannotated cluster |
| 3 | GP040483 | Unannotated cluster |
| 4 | GP070015 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
|
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for cicar_pan_p014790
Represented sequence(s):
CICAR_CDC_Frontier_kabuli
CICAR_ICC_4958_desi
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| medtr_pan_p018238 | orthology | 0.231 | 1 | 304 | 1.52e-103 |
| vitvi_pan_p015057 | orthology | 1 | 2 | 139 | 3.21e-40 |
| vitvi_pan_p035873 | orthology | 1 | 2 | - | - |