Gene cicar_pan_p014991
| Sequence ID | cicar_pan_p014991 add to my list | ||
|---|---|---|---|
| Species | Cicer arietinum | ||
| Alias | No gene alias | ||
| Pangenome status | Core (2/2) | ||
| Length | 389aa | ||
| Gene Ontology |
 Display term(s) (1)
|
Length: 389 amino acids
>cicar_pan_p014991_CICAR MTKEEDFKLLKIQTCVLKVNIHCDGCKQKVKKLLQRIEGVYQVQIDAEQQKVTVSGSVDS ATLIKKLVRSGKYAELWSQKTNNHQNQNQNQKQKNNNVKDDKNKGQKQVQALKIPAFSSE EDGEYYEDFEDDEDDEDEEMKFIREKANHLQMLRQQQATDANNVKKSIGAKMNNGGNKKG DANQNMGMKGSGVGVDQKTMAALKLNNGHLSSVESFNLGESKRSSDIGAIMNLAGFNGNS NGVGSATVLGGNSNSNGLGGFSIQSNNNNNNNMIQGSSASIPNGGYFTGQYPSSMLMNMN GFNNHPSPLMMNMNMQARHGMQQQQPQMMYQRSPFIPSNTGYYYNSNYYNSNYSPGNYTY ALPSYPTDDHSVAAHMFSDDNTSSSCSIM
Multiple alignment used to build consensus sequence:
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
| 2 | GP023608 | Unannotated cluster |
| 3 | GP040483 | Unannotated cluster |
| 4 | GP070015 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
|
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for cicar_pan_p014991
Represented sequence(s):
CICAR_CDC_Frontier_kabuli
CICAR_ICC_4958_desi
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| Cg2g033940.2 | orthology | 0.393 | 6 | 263 | 6.93e-85 |
| Cm053230.1 | orthology | 0.398 | 7 | 291 | 1.06e-95 |
| FvH4_4g32260.1 | orthology | 0.522 | 5 | 253 | 6.31e-81 |
| Manes.15G126600.1 | orthology | 0.467 | 6 | 273 | 6.99e-89 |
| Manes.17G075400.1 | orthology | 0.455 | 6 | - | - |
| maldo_pan_p009716 | orthology | 0.457 | 5 | - | - |
| maldo_pan_p033106 | orthology | 0.489 | 5 | 242 | 1.58e-76 |
| medtr_pan_p032193 | orthology | 0.149 | 1 | 435 | 1.27e-152 |
| orange1.1t04788.1 | orthology | 0.4 | 7 | 273 | 1.39e-88 |
| thecc_pan_p016247 | orthology | 0.442 | 6 | 319 | 6.8e-107 |
| vitvi_pan_p018179 | orthology | 0.352 | 3 | 314 | 6.66e-105 |
| vitvi_pan_p040075 | orthology | 0.392 | 3 | - | - |