Gene cocnu_pan_p009766
| Sequence ID | cocnu_pan_p009766 add to my list | ||
|---|---|---|---|
| Species | Cocos nucifera | ||
| Alias | No gene alias | ||
| Pangenome status | Core (2/2) | ||
| Length | 389aa | ||
| Gene Ontology |
 Display term(s) (1)
|
Length: 389 amino acids
>cocnu_pan_p009766_COCNU MTKDDNFKLLKIQTFILKVHIHCDGCTQEVKKILHRIEGVYTVSIDAEHQKVTVSGNVDS KTLIKKLARAGKHAELWTQKPNNQSHKPNQQHQAAHSLKDGNKNSKGQPNQALIQGLKAF NNQQHKFDSFSSDDEDYDDDDEVDVDELRLLGDKMNQLNLLRQANDAAAAAANAKKNGNA GGNGNNVAGKKGGGNPNQNVGLKGPTGPDQKGFNAAFPNYKMGNVAHLGGGSLNAGEGRR VGDINGLMGMGGIQGLGGNNGLGFHQAQHPQQQQQQQLGNTFPTGFPANGGGGLSGAYQA PMMGNLQAYQNHPSAMMMMNSRGLNNNMLMNESRYMQPQMMYNRAPQVPPYTGYYHPYYP SPYPYHQPETGDYGANLFSDENTSSCAVM
Multiple alignment used to build consensus sequence:
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
| 2 | GP023608 | Unannotated cluster |
| 3 | GP040483 | Unannotated cluster |
| 4 | GP070015 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
|
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for cocnu_pan_p009766
Represented sequence(s):
COCNU_C3B02_v2.0
COCNU_CATD
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| Mba01_g25980.1 | orthology | 0.438 | 3 | - | - |
| Mba08_g31430.1 | orthology | 0.461 | 3 | - | - |
| Mba09_g18120.1 | orthology | 0.465 | 3 | - | - |
| XP_010922573.1 | orthology | 0.0891 | 1 | 568 | 1.75e-204 |
| musac_pan_p000078 | orthology | 0.411 | 3 | - | - |
| musac_pan_p017962 | orthology | 0.37 | 3 | - | - |
| musac_pan_p032178 | orthology | 0.414 | 3 | - | - |