Gene cocnu_pan_p014481
Sequence ID | cocnu_pan_p014481 add to my list | ||
---|---|---|---|
Species | Cocos nucifera | ||
Alias | No gene alias | ||
Pangenome status | Core (2/2) | ||
Length | 263aa | ||
Gene Ontology |
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Length: 263 amino acids
>cocnu_pan_p014481_COCNU MGKKGKEGQGGGGGGGAGKKDDVTITVVLKVDMDCEGCVERVKKSVKGFKGVEDMKVDRG GGKLTVVGRVDPTKLRDRVAAKTHKKVDLVSPTPKKDAKEKENSKKPAGEKDSNKSDDKK SKEPVVSTVVLKIHLDCDGCIERIEKGIRKIKGVQVVTLDPQKDLVTVKGTMDAKALPEV LKEKLKRAVEVAPPKKNEGGEKKDKGGDKKEKGEGGGEGGNVDGWKGVAPSLMEYYAGYP YYVGMVYAPQLFSDDNPNACSVM
Multiple alignment used to build consensus sequence:
Clustering Level | Family ID | Family Name |
---|---|---|
1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
2 | Heavy metal transport/detoxification group1
GP015545 |
Heavy metal transport/detoxification group1 |
3 | GP040674 | Unannotated cluster |
4 | GP502442 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
ID | Name | Type |
---|---|---|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for cocnu_pan_p014481
Represented sequence(s):
COCNU_C3B02_v2.0
COCNU_CATD
Homology | RBH | ||||
---|---|---|---|---|---|
Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
Mba01_g27600.1 | orthology | 0.632 | 2 | - | - |
Mba01_g27610.1 | orthology | 0.974 | 3 | - | - |
XP_010935709.1 | orthology | 0.0902 | 1 | 376 | 7.36e-133 |
musac_pan_p011710 | orthology | 0.659 | 3 | - | - |