Gene cocnu_pan_p021385


Sequence ID cocnu_pan_p021385  add to my list
Species Cocos nucifera
Alias No gene alias
Pangenome status Dispensable (1/2)
Length 149aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 149 amino acids

>cocnu_pan_p021385_COCNU
MGGTLKYFAGLLGGSSRRKKRKQFQTVELKVRMDCDGCERKVKKALSSMKGVQSVDINRK
QQKVTVTGYVEQHKVLKKARSTGKKAEIWPYIPYNVVMHPYAAQAYDRRAPPGYVRNVEA
ITISSQPYRQEDQLTNLFSDENPNACSVM




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015397		 Heavy metal transport/detoxification group1
3 GP040065 Unannotated cluster
4 GP463617 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for cocnu_pan_p021385



Represented sequence(s):
COCNU_C3B02_v2.0
COCNU_HT001RO02_U03PF16760.1
Unrepresented genome(s):
COCNU_CATD


Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
XP_008790801.1 orthology 0.179 2 273 6.8e-96
XP_010939612.1 orthology 0.108 1 282 1.58e-99
cocnu_pan_p030765 ultra-paralogy 0.0011 0 - -