Gene cocnu_pan_p029006
| Sequence ID | cocnu_pan_p029006 add to my list |
|---|---|
| Species | Cocos nucifera |
| Alias | No gene alias |
| Pangenome status | Dispensable (1/2) |
| Length | 78aa |
Length: 78 amino acids
>cocnu_pan_p029006_COCNU MAIKYIGAVAASFTIAYLLDMAIAEKKIFGGSTPKTVADKEWWEATDKKFQAWPRTAGPP VVMNPLSRQNFIVKSTES
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Unknown function duf1138 family
GP002478 |
Unknown function duf1138 family |
| 2 | GP018276 | Unannotated cluster |
| 3 | GP042981 | Unannotated cluster |
| 4 | GP072479 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Protein of unknown function DUF1138
IPR009515
|
Protein of unknown function DUF1138 | Family |
Figure 1: IPR domains for cocnu_pan_p029006
Represented sequence(s):
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| Mba01_g28000.1 | orthology | 0.869 | 3 | - | - |
| Mba02_g06510.1 | orthology | 1 | 3 | - | - |
| Mba07_g04570.1 | orthology | 1 | 3 | 129 | 2.02e-40 |
| XP_019709224.1 | orthology | 0.366 | 1 | - | - |
| cocnu_pan_p023003 | ultra-paralogy | 0.0011 | 0 | - | - |
| musac_pan_p013029 | orthology | 0.868 | 3 | - | - |
| musac_pan_p019196 | orthology | 0.947 | 3 | 129 | 3.36e-41 |
| musac_pan_p041148 | orthology | 1 | 3 | - | - |
| musac_pan_p043143 | orthology | 1 | 3 | - | - |