Gene cocnu_pan_p034793
Sequence ID | cocnu_pan_p034793 add to my list | ||
---|---|---|---|
Species | Cocos nucifera | ||
Alias | No gene alias | ||
Pangenome status | Dispensable (1/2) | ||
Length | 382aa | ||
Gene Ontology |
![]()
|
Length: 382 amino acids
>cocnu_pan_p034793_COCNU MTKHEDFKLLKIQTFILKVNIHCDGCKQEVKKLLQRIEGVYTVSIDAEQQKVTVSGNVDS KTLIKKLAKSGKHAELWTQKPNNQSHKPNQQHQAAQSLKDVKKSNKGQPNQALIQGLKAF KNQHGKLDSFSSDDEDYDEDDDDDEPQLLGNKMNQFNLLRQANNAAAAAAAASVKENGNA GNGNNGAGKKIGNSNQNMGLKGPNGPDLKGLNGALPNNKMGNVAHFAGGNFGAGEGKRVS DINGLMGMGGHQRVGGNNGLGFHQAAQQQPGNTFPSGFPTTGGGGGLGGVHQAAMMGNLQ AYQNHPTSMMMNLRGLNNNNMLMNESRYMQPQMMYNRATHIPPYTGYYYPYYPSPYLNHQ SETADYGAHLFSDENTSSCAVM
Clustering Level | Family ID | Family Name |
---|---|---|
1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
2 | GP023608 | Unannotated cluster |
3 | GP040483 | Unannotated cluster |
4 | GP070015 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
ID | Name | Type |
---|---|---|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for cocnu_pan_p034793
Represented sequence(s):
Homology | RBH | ||||
---|---|---|---|---|---|
Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
Mba01_g25980.1 | orthology | 0.448 | 3 | - | - |
Mba08_g31430.1 | orthology | 0.47 | 3 | - | - |
Mba09_g18120.1 | orthology | 0.475 | 3 | - | - |
XP_010906973.1 | orthology | 0.0526 | 1 | 649 | 9.86e-237 |
cocnu_pan_p026158 | ultra-paralogy | 0.0075 | 0 | - | - |
musac_pan_p000078 | orthology | 0.42 | 3 | 314 | 3.48e-105 |
musac_pan_p017962 | orthology | 0.38 | 3 | - | - |
musac_pan_p032178 | orthology | 0.423 | 3 | - | - |