Gene cucsa_pan_p000119
Sequence ID | cucsa_pan_p000119 add to my list | ||
---|---|---|---|
Species | Cucumis sativus | ||
Alias | No gene alias | ||
Pangenome status | Core (3/3) | ||
Length | 241aa | ||
Gene Ontology |
Display term(s) (1)
|
Length: 241 amino acids
>cucsa_pan_p000119_CUCSA MKKLDIFCKSRASTAVRSSFARRPLTGDAHSGDRRKGQLHFENHRKSTSCSTLNRKELND LRRKSCADVDDLKSPVSGSSARYLLGDSPFLDWFPAVSGEEVPALMPEKRKIISDNSQKS FLLNRSLTVREYGGLKSPSSVLESPVLKTPSLTQSRDQVVVLKVSLNCRGCEKKVKKHIS KMEGVTSYSVDFTTKKVTIIGDITPFDVLASVSKVKSAQFWPSPNSSSSSTPQSSSSSST F
Multiple alignment used to build consensus sequence:
Clustering Level | Family ID | Family Name |
---|---|---|
1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
2 | GP015837 | Unannotated cluster |
3 | GP040905 | Unannotated cluster |
4 | GP070656 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
ID | Name | Type |
---|---|---|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for cucsa_pan_p000119
Represented sequence(s):
Homology | RBH | ||||
---|---|---|---|---|---|
Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
MELO3C013671.2.1 | orthology | 0.07 | 1 | 349 | 6.99e-124 |
Oeu023871.2 | orthology | 1 | 2 | - | - |